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p57 is a molecular switch of adult stem cell quiescence in mouse stomach
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dc.contributor.advisor 김종경 -
dc.contributor.author Somi Kim -
dc.date.accessioned 2022-03-07T16:00:30Z -
dc.date.available 2022-03-07T16:00:30Z -
dc.date.issued 2022 -
dc.identifier.uri http://dgist.dcollection.net/common/orgView/200000591934 en_US
dc.identifier.uri http://hdl.handle.net/20.500.11750/16308 -
dc.description stomach,gastric chief cells,base stem cells,stem cell quiescence,p57,scRNA-seq -
dc.description.statementofresponsibility N -
dc.description.tableofcontents I. Introduction 1
1.1 The structure of stomach epithelium 1
1.2 The stem cell population in stomach epithelium 1
1.3 Damage response of base stem cells in stomach epithelium 1
II. Preliminary data 2
2.1. Essential gene alterations happen in Troy+ chief cells during injury repair 2
2.2. p57-expressing chief cells directly undergo transition to injury-responsive chief cells upon injury 2
2.3. p57 induces reserve stem cell-like state in gastric corpus organoids 3
III. Methods 3
3.1. Animals 3
3.2. Animal treatments 4
3.3. Library preparation and bulk RNA-seq in Troy+ chief cells 4
3.4. Generation of single-cell RNA-seq data 4
3.5. Time-course RNA-seq data analysis 4
3.6. scRNA-seq data preprocessing 6
3.7. scRNA-seq data analysis 7
IV. Results 8
4.1. Rapid transcriptional changes happen in Troy+ chief cells during injury repair 8
4.2. Single-cell transcriptomic analysis defines a specific injury-responsive chief cell population 11
V. Discussion 16
References 18
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dc.format.extent 23 -
dc.language eng -
dc.publisher DGIST -
dc.subject stomach,gastric chief cells,base stem cells,stem cell quiescence,p57,scRNA-seq -
dc.title p57 is a molecular switch of adult stem cell quiescence in mouse stomach -
dc.type Thesis -
dc.identifier.doi 10.22677/thesis.200000591934 -
dc.description.degree Master -
dc.contributor.department New Biology -
dc.identifier.bibliographicCitation Somi Kim. (2022). p57 is a molecular switch of adult stem cell quiescence in mouse stomach. doi: 10.22677/thesis.200000591934 -
dc.contributor.coadvisor JaeHyung Koo -
dc.date.awarded 2022/02 -
dc.publisher.location Daegu -
dc.description.database dCollection -
dc.citation XT.NM 김55 202202 -
dc.date.accepted 1/21/22 -
dc.contributor.alternativeDepartment 뉴바이올로지전공 -
dc.embargo.liftdate 20260228 -
dc.contributor.affiliatedAuthor Somi Kim -
dc.contributor.affiliatedAuthor Jong Kyoung Kim -
dc.contributor.affiliatedAuthor JaeHyung Koo -
dc.contributor.alternativeName 김소미 -
dc.contributor.alternativeName Jong Kyoung Kim -
dc.contributor.alternativeName 구재형 -
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