Cited time in webofscience Cited time in scopus

Full metadata record

DC Field Value Language
dc.contributor.advisor 유성운 -
dc.contributor.author Jeeyeon Hong -
dc.date.accessioned 2020-06-22T16:00:23Z -
dc.date.available 2020-06-22T16:00:23Z -
dc.date.issued 2020 -
dc.identifier.uri http://dgist.dcollection.net/common/orgView/200000283240 en_US
dc.identifier.uri http://hdl.handle.net/20.500.11750/11954 -
dc.description adult neurogenesis, autolysosome, autophagosome maturation, FAIM2, LC3, LIR, xbx-6 -
dc.description.abstract In the adult brain, programmed cell death (PCD) is a critical process to maintain an
adequate pool of self-renewing neural stem cells (NSCs) and newly generated cells in the
brain. To date, the studies of key players regulating PCD have been extensively centered
around apoptosis. Therefore, I sought to expand the knowledge on underlying mechanisms
of autophagic cell death. Based on the gene expression profiling of the model of autophagic
cell death in NSCs, I discovered Fas apoptotic inhibitory molecule 2 (FAIM2) as one of the
marker genes. FAIM2 is a seven-transmembrane domain-containing protein that plays a
neuroprotective role via antagonizing the extrinsic apoptosis signaling. However, whether
FAIM2 plays a role in other forms of molecular signaling has been unknown.
Here I show that FAIM2 localizes to the lysosomes at basal state and facilitates autophagy
through interaction with LC3 in human neuroblastoma SH-SY5Y cells. FAIM2
overexpression increased autophagy flux, while autophagy flux was impaired in shRNAmediated
knockdown (shFAIM2) cells, and the impairment was more evident in the
presence of rapamycin. In shFAIM2 cells, autophagosome maturation through fusion with
lysosomes was impaired, leading to accumulation of autophagosomes. A functional LC3-
interacting region motif within FAIM2 was essential for the interaction with LC3 and the
rescue of autophagy flux in shFAIM2 cells, while LC3-binding property of FAIM2 was
dispensable for the anti-apoptotic function in response to Fas receptor-mediated apoptosis.
Suppression of autophagosome maturation was also observed in a null mutant of
Caenorhabditis elegans lacking xbx-6, the ortholog of FAIM2. Current study suggests that
FAIM2 is a novel regulator of autophagy mediating autophagosome maturation through the
interaction with LC3.
-
dc.description.statementofresponsibility open -
dc.description.tableofcontents CHAPTER 1: General Introduction 1
1.1 Programmed Cell Death: The Classifications 2
1.1.1 Autophagic cell death 2
1.1.2 Apoptosis 3
1.1.3 Necrosis 3
1.2 Regulation of Programmed Cell Death and Adult Neurogenesis 7
1.2.1 Insulin on NSCs 7
1.2.2 IGF-1 on NSCs 7
1.2.3 Steroid hormones on NSCs 8
1.2.4 Stress hormones on NSCs 9
1.3 Fas apoptotic inhibitory molecule 2 11
1.4 Aim and Objectives 13
CHAPTER 2: Identification of FAIM2 in Adult Hippocampal NSCs 14
2.1 Introduction 14
2.2 Materials and Methods 14
2.2.1 Cell culture and reagents 14
2.2.2 Quantitative real-time RT-PCR 15
2.2.3 Statistical analysis 16
2.3 Results 17
2.3.1 FAIM2 is expressed in the adult brain and in hippocampal NSCs 17
2.3.2 Differential dynamics of FAIM2 following insulin withdrawal 17
2.3.3 Faim2 knockdown sensitizes NSCs to Fas ligand 22
2.3.4 Faim2 knockdown sensitizes NSCs to autophagic cell Death 22
CHAPTER 3: Fas-apoptotic inhibitory molecule 2 localizes to the lysosome and facilitates autophagosome-lysosome fusion through the LC3 interaction region motif-dependent interaction with LC3
3.1 Introduction 24
3.2 Materials and Methods 27
3.2.1 Cell culture and shRNA knockdown 29
3.2.2 C. elegans strains and quantification of autophagic vesicles 29
3.2.3 Antibodies and reagents 30
3.2.4 Immunocytochemistry and confocal microscopy 32
3.2.5 Immunoblotting 32
3.2.6 Immunoprecipitation (IP) 33
3.2.7 Live-cell Imaging 34
3.2.8 In situ Proximity Ligation Assay (PLA) 34
3.2.9 Flow cytometry 35
3.2.10 LC3-interacting region (LIR) motif prediction 35
3.2.11 Cell viability assay 36
3.2.12 Apoptotic cell death assay 36
3.2.13 Image and statistical analysis 37
3.3. Results 38
3.3.1 FAIM2 overexpression elevates basal and rapamycin-activated autophagy in SH-SY5Y cells 38
3.3.2 FAIM2 knockdown impairs autophagic flux by blocking autophagosome maturation 41
3.3.4 FAIM2 localization to MAP1LC3B- and LAMP1-positive organelles is robustly increased under rapamycin-induced autophagy 46
3.3.4 FAIM2 plays an integral role in the biogenesis of acidified lysosomes 50
3.3.5 FAIM2 localizes to lysosomes and is required for autophagosome maturation 53
3.3.6 FAIM2 directly binds to the lipidated form of LC3 via its N-terminal LIR motif 57
3.3.7 XBX-6, the FAIM2 ortholog in C. elegans, mediates autolysosome formation 66
3.3.8 LIR motif of FAIM2 is not required for anti-apoptotic function 69
3.4 Discussion 72
REFERENCES 77
Abstract in Korean 94
-
dc.format.extent 94 -
dc.language eng -
dc.publisher DGIST -
dc.source /home/dspace/dspace53/upload/200000283240.pdf -
dc.title Fas apoptotic inhibitory molecule 2: a novel regulator of autophagy by facilitating autophagosome-lysosome fusion -
dc.type Thesis -
dc.identifier.doi 10.22677/Theses.200000283240 -
dc.description.alternativeAbstract 세포 사멸 (PCD) 은 성인 뇌에서, 성체 해마 신경 줄기세포 (NSC) 및 비이상적인 세포를 제거하
는 작용으로 알려져 있다. 지금까지 PCD를 구성하는 주요 유전자 및 단백질 조절자에 대한 연
구는 apoptosis를 중심으로 이루어졌다. 반면에, autophagic cell death의 기저 메커니즘에 대한 이
해는 부족한 현황이다. 따라서, 유전자 발현 프로파일링에 기초하여, NSC에서 autophagic cell
death를 조절하는 유전자 후보를 찾고자 하였다. 그 중. Fas apoptosis inhibotry molecule 2 (FAIM2)
를 발견하였다. FAIM2는 외인성 아팝토시스 신호 전달을 대항함으로써 신경 보호 역할을 하는
단백질이다. 지금까지 다른 형태의 분자 신호 전달에 기여하는 FAIM2의 역할의 여부는 잘 알
려지지 않음으로 autophagic cell death 및 자가 포식 작용과의 관련성을 규명하고자 하였다.
본 연구에서, FAIM2가 성체 해마 신경 줄기세포와 human neuroblastoma SH-SY5Y 세포
에서 특이적으로 리소좀에 위치한다는 것을 관찰하였다. Autophagic cell death는 자가 포식 작
용의 기전을 공유한다. 리소좀은 자가소화포와 결합하여 내용물을 분해하는 데 필수적이다.
FAIM2는 라파마이신으로 유발된 자가 포식 작용에서 리소좀에 위치하여, LC3와의 상호 작용
을 통해 autophagy를 촉진 시키는 것을 실험적으로 증명하였다. 또한, 해당 상호 작용을 매개 하
는데 필수적인 단백질 motif를 규명하였다. FAIM2 가 결핍된 세포에서는 리소좀과의 융합을 통
한 자가 포식 소체 성숙이 손상되어 포식 소체가 축적된 것을 확인하였다.
분자생물학적인 기전의 연구 결과를 통해, 외인적 아팝토시스에 국한하여 알려져 있던
FAIM2의 새로운 역할을 규명함으로써 신경 조절자로서의 새로운 가능성을 제시하였다.
-
dc.description.degree Doctor -
dc.contributor.department Brain and Cognitive Sciences -
dc.contributor.coadvisor Seong Who Kim -
dc.date.awarded 2020-02 -
dc.publisher.location Daegu -
dc.description.database dCollection -
dc.citation XT.BD 홍78 202002 -
dc.date.accepted 2020-01-20 -
dc.contributor.alternativeDepartment 뇌인지과학전공 -
dc.contributor.affiliatedAuthor Yu, Seong-Woon -
dc.contributor.affiliatedAuthor Hong, Jeeyeon -
dc.contributor.affiliatedAuthor Kim, Seong Who -
dc.contributor.alternativeName 홍지연 -
dc.contributor.alternativeName 김승후 -
dc.contributor.alternativeName Seong-Woon Yu -
Files in This Item:
200000283240.pdf

200000283240.pdf

기타 데이터 / 18.46 MB / Adobe PDF download
Appears in Collections:
Department of Brain Sciences Theses Ph.D.

qrcode

  • twitter
  • facebook
  • mendeley

Items in Repository are protected by copyright, with all rights reserved, unless otherwise indicated.

BROWSE