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Single-cell RNA sequencing reveals that Baf contributes to neural progenitor competence of Drosophila nervous system in a lineage-specific manner

Title
Single-cell RNA sequencing reveals that Baf contributes to neural progenitor competence of Drosophila nervous system in a lineage-specific manner
Alternative Title
단일 세포 전사체 분석을 통한 Drosophila 신경계 내에서 Baf가 계통특이적 신경전구세포 분화능에 미치는 영향에 관한 연구
Author(s)
Dong Gon Cha
DGIST Authors
Dong Gon ChaJong Kyoung KimJune M. Kwak
Advisor
김종경
Co-Advisor(s)
June M. Kwak
Issued Date
2022
Awarded Date
2022/02
Type
Thesis
Subject
scRNA-seq, Barrier to autointegration factor (Baf), chromatin organization, neural progenitor competence, neurodevelopment
Description
scRNA-seq, Barrier to autointegration factor (Baf), chromatin organization, neural progenitor competence, neurodevelopment
Table Of Contents
I. Introduction 1
II. Preliminaries 3
2.1 Drosophila neuroblasts with Baf knockdown shows abnormal chromatin organization and formation of neuroblast clones 3
2.2 pan-neuronal knockdown of Baf induces marked reduction of excitatory neurons at the adult stage 3
2.3 Neuronal knockdown of Baf induces behavioral abnormalities at the adult stage 4
III. Results 5
3.1 scRNA-seq identifies cell types in neuronal lineage from control and Baf KD Drosophila 5
3.2 Baf knockdown induces transcriptional changes in Type I neuroblasts 7
3.3 Type I neuroblast-specific neurodevelopment is impaired by Baf knockdown 8
IV. Discussion 11
V. Materials and methods 13
5.1 Sample preparation for single-cell sequencing 13
5.2 scRNA-seq data preprocessing 13
5.3 scRNA-seq data analysis 14
References 15
요약문 20
URI
http://dgist.dcollection.net/common/orgView/200000591876

http://hdl.handle.net/20.500.11750/16326
DOI
10.22677/thesis.200000591876
Degree
Master
Department
New Biology
Publisher
DGIST
Related Researcher
  • 곽준명 Kwak, June Myoung 뉴바이올로지학과
  • Research Interests Calcium Signaling; ABA;ROS Signaling; plant development; Development of Abscission; Culluar Features; Signaling network; Environmental Regulation
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Department of New Biology Theses Master

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