Full metadata record
| DC Field | Value | Language |
|---|---|---|
| dc.contributor.advisor | 김대훈 | - |
| dc.contributor.author | Jeongmin Bae | - |
| dc.date.accessioned | 2022-07-07T02:29:06Z | - |
| dc.date.available | 2022-07-07T02:29:06Z | - |
| dc.date.issued | 2021 | - |
| dc.identifier.uri | http://dgist.dcollection.net/common/orgView/200000362726 | en_US |
| dc.identifier.uri | http://hdl.handle.net/20.500.11750/16667 | - |
| dc.description.statementofresponsibility | N | - |
| dc.description.tableofcontents | Ⅰ. INTRODUCTION 1 1.1 Background 1 1.2 Review of MRPrimer 3 Ⅱ. IMPLEMENTATION 6 2.1 Overview of GPrimer 6 2.2 Steps 1~3: Building Hash Maps and Processing using CPU threads 6 2.3 Step 4: Building Arrays and General Cross-Hybridization Filtering 8 2.4 Step 5: Pair Filtering and Ranking 16 Ⅲ. RESULTS 20 3.1 Experimental setup and Data sets 20 3.2 Performance Comparison with MRPrimer 21 3.3 Performance of GPrimer varying the number of GPUs 22 3.4 Effectiveness of workload balancing and streaming-copy 24 3.5 Memory usage 26 Ⅳ. CONCLUSIONS 27 Ⅴ. REFERENCES 28 |
- |
| dc.format.extent | 31 | - |
| dc.language | eng | - |
| dc.publisher | DGIST | - |
| dc.subject | Primer design, GPU computation, Sequence analysis, 프라이머 디자인, GPU 연산, 시퀀스 분석 | - |
| dc.title | GPrimer: a fast GPU-based pipeline for primer design for qPCR experiments | - |
| dc.title.alternative | 프라이머 제한 조건과 특이성 조건을 동시에 만족하는 유효한 모든 프라이머를 GPU를 활용해 빠르게 디자인하는 방법 | - |
| dc.type | Thesis | - |
| dc.identifier.doi | 10.22677/thesis.200000362726 | - |
| dc.description.degree | Master | - |
| dc.contributor.department | Information and Communication Engineering | - |
| dc.contributor.coadvisor | Min-soo Kim | - |
| dc.date.awarded | 2021/02 | - |
| dc.publisher.location | Daegu | - |
| dc.description.database | dCollection | - |
| dc.citation | XT.IM 배74 202102 | - |
| dc.contributor.alternativeDepartment | 정보통신융합전공 | - |
| dc.embargo.liftdate | 2023-02-28 | - |
| dc.contributor.affiliatedAuthor | Jeongmin Bae | - |
| dc.contributor.affiliatedAuthor | Daehoon Kim | - |
| dc.contributor.affiliatedAuthor | Min-soo Kim | - |
| dc.contributor.alternativeName | 배정민 | - |
| dc.contributor.alternativeName | Daehoon Kim | - |
| dc.contributor.alternativeName | 김민수 | - |
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