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  Department of Brain Sciences Laboratory of Protein Biophysics

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Article
The N-terminal order-disorder transition is a critical determinant for a metamorphosis of IscU
  • Na, Jongbum ; 
  • Heo, Joongyu ; 
  • Jeong, Minchan ; 
  • Kim, Beom Soo ; 
  • Ji, Sangho ; 
  • Ko, Young Ho ; 
  • Shafiei, Alaleh ; 
  • Baldir, Nilufer ; 
  • DeMirci, Hasan ; 
  • Yu, Wookyung ; 
    • et al
  • 2025-09
  • International Journal of Biological Macromolecules, v.323, no.1
  • Elsevier
  • View : 3408
  • Download : 0
Article
Protein Microplastic Coronation Complexes Trigger Proteome Changes in Brain-Derived Neuronal and Glial Cells
  • Ashim, Janbolat ; 
  • Ji, Sangho ; 
  • Kim, Hee-Yeon ; 
  • Lee, Seoung-Woo ; 
  • Jang, Soyoung ; 
  • Kim, Wansoo ; 
  • Han, Sehyeon ; 
  • Kim, Choonok ; 
  • Park, Song ; 
  • Park, Jin-Kyu ; 
    • et al
  • 2025-07
  • Environmental Science & Technology, v.59, no.29, pp.14993 - 15004
  • American Chemical Society
  • View : 2982
  • Download : 0
Article
Research approaches for exploring the hidden conversations of G protein-coupled receptor transactivation
  • Ashim, Janbolat ; 
  • Seo, Min Jae ; 
  • Ji, Sangho ; 
  • Heo, Joongyu ; 
  • Yu, Wookyung
  • 2025-06
  • Ashim, Janbolat. (2025-06). Research approaches for exploring the hidden conversations of G protein-coupled receptor transactivation. Molecular Pharmacology, 107(6). doi: 10.1016/j.molpha.2025.100043
  • Elsevier
  • View : 333
  • Download : 0
Article
Unlocking the serine mischarging paradox and inhibiting lactyltransferase activity of AlaRS by a single-point mutation
  • Park, Wooyoung ; 
  • Son, Se-Young ; 
  • Yi, Joonyeop ; 
  • Cha, Seungwoo ; 
  • Moon, Hankyeol ; 
  • Kim, Minyoung ; 
  • Ji, Sangho ; 
  • Yu, Wookyung ; 
  • Sung, Changmin ; 
  • Cha, Sun-Shin ; 
    • et al
  • 2025-06
  • Park, Wooyoung. (2025-06). Unlocking the serine mischarging paradox and inhibiting lactyltransferase activity of AlaRS by a single-point mutation. Nucleic Acids Research, 53(11). doi: 10.1093/nar/gkaf462
  • Oxford University Press
  • View : 176
  • Download : 0
Article
Identification of potential Abl kinase inhibitors using virtual screening and free energy calculations for the treatment of chronic myeloid leukemia
  • 2025-09
  • Kim, Beom Soo. (2025-09). Identification of potential Abl kinase inhibitors using virtual screening and free energy calculations for the treatment of chronic myeloid leukemia. Biophysical Chemistry, 324. doi: 10.1016/j.bpc.2025.107470
  • Elsevier
  • View : 301
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Uncovering conserved networks and global conformational changes in G protein-coupled receptor kinases

Article
Uncovering conserved networks and global conformational changes in G protein-coupled receptor kinases
  • 2024-12
  • Seo, Min Jae. (2024-12). Uncovering conserved networks and global conformational changes in G protein-coupled receptor kinases. Computational and Structural Biotechnology Journal, 23, 3445–3453. doi: 10.1016/j.csbj.2024.09.014
  • Elsevier
  • View : 137
  • Download : 38
Article
Roles of the gate loop in β-arrestin-1 conformational dynamics and phosphorylated receptor interaction
  • Kim, Kiae ; 
  • Ashim, Janbolat ; 
  • Ham, Donghee ; 
  • Yu, Wookyung ; 
  • Chung, Ka Young
  • 2024-09
  • Kim, Kiae. (2024-09). Roles of the gate loop in β-arrestin-1 conformational dynamics and phosphorylated receptor interaction. Structure, 32(9), 1358–1366. doi: 10.1016/j.str.2024.05.014
  • Cell Press
  • View : 174
  • Download : 0

GAN-WGCNA: Calculating gene modules to identify key intermediate regulators in cocaine addiction

Article
GAN-WGCNA: Calculating gene modules to identify key intermediate regulators in cocaine addiction
  • Kim, Taehyeong ; 
  • Lee, Kyoungmin ; 
  • Cheon, Mookyung ; 
  • Yu, Wookyung
  • 2024-10
  • Kim, Taehyeong. (2024-10). GAN-WGCNA: Calculating gene modules to identify key intermediate regulators in cocaine addiction. PLoS ONE, 19(10). doi: 10.1371/journal.pone.0311164
  • Public Library of Science
  • View : 91
  • Download : 27

Structural and biochemical investigation into stable FGF2 mutants with novel mutation sites and hydrophobic replacements for surface-exposed cysteines

Article
Structural and biochemical investigation into stable FGF2 mutants with novel mutation sites and hydrophobic replacements for surface-exposed cysteines
  • An, Young Jun ; 
  • Jung, Ye-Eun ; 
  • Lee, Kyeong Won ; 
  • Kaushal, Prashant ; 
  • Ko, In Young ; 
  • Shin, Seung Min ; 
  • Ji, Sangho ; 
  • Yu, Wookyung ; 
  • Lee, Cheolju ; 
  • Lee, Won-Kyu ; 
    • et al
  • 2024-09
  • An, Young Jun. (2024-09). Structural and biochemical investigation into stable FGF2 mutants with novel mutation sites and hydrophobic replacements for surface-exposed cysteines. PLoS ONE, 19(9). doi: 10.1371/journal.pone.0307499
  • Public Library of Science
  • View : 93
  • Download : 33

Anti-Melanoma efficacy of traditional multi-herbal extracts from mongolian ethnomedicine on B16F10 murine cells

Article
Anti-Melanoma efficacy of traditional multi-herbal extracts from mongolian ethnomedicine on B16F10 murine cells
  • Dauletkhan, Yerkegul ; 
  • Han, Tae Young ; 
  • Ashim, Janbolat ; 
  • Baasanmunkh, Shukherdorj ; 
  • Khajidsuren, Altantsetseg ; 
  • Yu, Wookyung ; 
  • Naidansuren, Purevjargal ; 
  • Gulzada, Uteubayeva ; 
  • Choi, Kang Duk ; 
  • Oyungerel, Baatartsogt
  • 2024-04
  • Dauletkhan, Yerkegul. (2024-04). Anti-Melanoma efficacy of traditional multi-herbal extracts from mongolian ethnomedicine on B16F10 murine cells. Current Research in Biotechnology, 7. doi: 10.1016/j.crbiot.2024.100217
  • Elsevier
  • View : 209
  • Download : 41
Article
Veratramine Inhibits the Cell Cycle Progression, Migration, and Invasion via ATM/ATR Pathway in Androgen-Independent Prostate Cancer
  • Kim, Hee-Yeon ; 
  • Lee, Seoung-Woo ; 
  • Choi, Seong-Kyoon ; 
  • Ashim, Janbolat ; 
  • Kim, Wansoo ; 
  • Beak, Su-Min ; 
  • Park, Jin-Kyu ; 
  • Han, Jee Eun ; 
  • Cho, Gil-Jae ; 
  • Ryoo, Zae Young ; 
    • et al
  • 2023-06
  • Kim, Hee-Yeon. (2023-06). Veratramine Inhibits the Cell Cycle Progression, Migration, and Invasion via ATM/ATR Pathway in Androgen-Independent Prostate Cancer. American Journal of Chinese Medicine, 51(5), 1309–1333. doi: 10.1142/S0192415X2350060X
  • World Scientific Publishing Co
  • View : 163
  • Download : 0
Article
A preliminary study about the potential risks of the UV-weathered microplastic: The proteome-level changes in the brain in response to polystyrene derived weathered microplastics
  • 2023-09
  • Kim, Hee-Yeon. (2023-09). A preliminary study about the potential risks of the UV-weathered microplastic: The proteome-level changes in the brain in response to polystyrene derived weathered microplastics. Environmental Research, 233. doi: 10.1016/j.envres.2023.116411
  • Academic Press Inc.
  • View : 473
  • Download : 0
Article
Molecular basis of the PIP2-dependent regulation of Ca(v)2.2 channel and its modulation by Ca-v beta subunits
  • 2022-11
  • Park, Cheon-Gyu. (2022-11). Molecular basis of the PIP2-dependent regulation of Ca(v)2.2 channel and its modulation by Ca-v beta subunits. eLife, 11. doi: 10.7554/eLife.69500
  • eLife Sciences Publications
  • View : 382
  • Download : 0
Article
Dual Effects of Presynaptic Membrane Mimetics on alpha-Synuclein Amyloid Aggregation
  • Lin, Yuxi ; 
  • Ito, Dai ; 
  • Yoo, Je Min ; 
  • Lim, Mi Hee ; 
  • Yu, Wookyung ; 
  • Kawata, Yasushi ; 
  • Lee, Young-Ho
  • 2022-06
  • Lin, Yuxi. (2022-06). Dual Effects of Presynaptic Membrane Mimetics on alpha-Synuclein Amyloid Aggregation. Frontiers in Cell and Developmental Biology, 10. doi: 10.3389/fcell.2022.707417
  • Frontiers Media S.A.
  • View : 488
  • Download : 0
Article
NOLC1 knockdown suppresses prostate cancer progressions by reducing AKT phosphorylation and β-catenin accumulation
  • Kim, Wansoo ; 
  • Yeo, Dong-Yeop ; 
  • Choi, Seong-Kyoon ; 
  • Kim, Hee-Yeon ; 
  • Lee, Seoung-Woo ; 
  • Ashim, Janbolat ; 
  • Han, Jee Eun ; 
  • Yu, Wookyung ; 
  • Jeong, Hyohoon ; 
  • Park, Jin-Kyu ; 
    • et al
  • 2022-12
  • Kim, Wansoo. (2022-12). NOLC1 knockdown suppresses prostate cancer progressions by reducing AKT phosphorylation and β-catenin accumulation. Biochemical and Biophysical Research Communications, 635, 99–107. doi: 10.1016/j.bbrc.2022.10.038
  • Academic Press
  • View : 507
  • Download : 0

Unveiling OASIS family as a key player in hypoxia–ischemia cases induced by cocaine using generative adversarial networks

Article
Unveiling OASIS family as a key player in hypoxia–ischemia cases induced by cocaine using generative adversarial networks
  • Lee, Kyoungmin ; 
  • Kim, Taehyeong ; 
  • Cheon, M. ; 
  • Yu, Wookyung
  • 2022-04
  • Lee, Kyoungmin. (2022-04). Unveiling OASIS family as a key player in hypoxia–ischemia cases induced by cocaine using generative adversarial networks. Scientific Reports, 12(1). doi: 10.1038/s41598-022-10772-1
  • Nature Publishing Group
  • View : 364
  • Download : 10
Article
Computational design of a thermolabile uracil-DNA glycosylase of Escherichia coli
  • Park, Seong Jun ; 
  • Shin, Y.-K. ; 
  • Yoon, J.-Y. ; 
  • Nam, K.-H. ; 
  • Munashingha, P.R. ; 
  • Park, S. ; 
  • Park, S.-Y. ; 
  • Kim, S. ; 
  • Lee, Juhwan ; 
  • Seo, Min Jae ; 
    • et al
  • 2022-04
  • Park, Seong Jun. (2022-04). Computational design of a thermolabile uracil-DNA glycosylase of Escherichia coli. Biophysical Journal, 121(7), 1276–1288. doi: 10.1016/j.bpj.2022.02.027
  • Biophysical Society
  • View : 544
  • Download : 0

Aggregation-Prone Structural Ensembles of Transthyretin Collected With Regression Analysis for NMR Chemical Shift

Article
Aggregation-Prone Structural Ensembles of Transthyretin Collected With Regression Analysis for NMR Chemical Shift
  • 2021-10
  • Yang, Wonjin. (2021-10). Aggregation-Prone Structural Ensembles of Transthyretin Collected With Regression Analysis for NMR Chemical Shift. Frontiers in Molecular Biosciences, 8. doi: 10.3389/fmolb.2021.766830
  • Frontiers Media S.A.
  • View : 598
  • Download : 91
Article
Molecular Effects of Elongation Factor Ts and Trigger Factor on the Unfolding and Aggregation of Elongation Factor Tu Induced by the Prokaryotic Molecular Chaperone Hsp33
  • Keum, Minho ; 
  • Ito, Dai ; 
  • Kim, Mi-Seong ; 
  • Lin, Yuxi ; 
  • Yoon, Kyeong-Hyeon ; 
  • Kim, Jihoon ; 
  • Lee, Sung-Hee ; 
  • Kim, Ji-Hun ; 
  • Yu, Wookyung ; 
  • Lee, Young-Ho ; 
    • et al
  • 2021-11
  • Keum, Minho. (2021-11). Molecular Effects of Elongation Factor Ts and Trigger Factor on the Unfolding and Aggregation of Elongation Factor Tu Induced by the Prokaryotic Molecular Chaperone Hsp33. doi: 10.3390/biology10111171
  • Multidisciplinary Digital Publishing Institute (MDPI)
  • View : 373
  • Download : 0
Article
Structural mechanism for regulation of Rab7 by site-specific monoubiquitination
  • Jung, J. ; 
  • Baek, J. ; 
  • Tae, K. ; 
  • Shin, D. ; 
  • Han, S. ; 
  • Yang,Wonjin ; 
  • Yu, Wookyung ; 
  • Jung, S.M. ; 
  • Park, S.H. ; 
  • Choi, C.Y. ; 
    • et al
  • 2022-01
  • Jung, J. (2022-01). Structural mechanism for regulation of Rab7 by site-specific monoubiquitination. International Journal of Biological Macromolecules, 194, 347–357. doi: 10.1016/j.ijbiomac.2021.11.074
  • Elsevier BV
  • View : 518
  • Download : 0
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